Varathon
importedsoftware/varathon
A scalable variant calling and benchmarking framework supporting both short and long reads.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/yjx1217/Varathon
- Documentation
- unknown
- Tags
- genomics · long-reads · read-mapping · short-reads · structural-variation · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- FragGeneScanRsgenomics · short-reads
Better and faster Rust implementation of the FragGeneScan gene prediction model for short and error-prone reads.
- MGSEgenomics · read-mapping
Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.
- arcsvgenomics · structural-variation · variant-calling
Complex structural variant detection from WGS data
- dysgugenomics · structural-variation · variant-calling
Toolkit for calling structural variants using short or long reads
- OctopuSVgenomics · structural-variation · variant-calling
Merge and compare structural variants across callers, samples, and platforms. Standardizes BND-heavy output from GRIDSS, SvABA, Sniffles, and more.
- long-read-pipelineslong-reads · variant-calling
Long read production pipelines
- api.github.com/repos/yjx1217/Varathonretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-09-28, 14 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/20.json→ .entries["varathon"]
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