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mavis

imported

software/mavis

Merging, Annotation, Validation, and Illustration of Structural variants

Machine-generated from the listed sources and not yet reviewed by a human.

mavis project image
GitHub preview card for bcgsc/mavis. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
GPL-3.0(osi)
Status
dormant
Maturity
deployed
Organization
bcgsc
Country
unknown
Homepage
mavis.bcgsc.ca
Repository
github.com/bcgsc/mavis
Documentation
unknown
Tags
bioinformatics · genomics · python · structural-variation · transcriptome · visualization
Regulatory
unknown
built by · 5

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • RATTLEbioinformatics · genomics · transcriptome

    Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

  • TrendCatchertranscriptome · visualization

    TrendCatcher is an open source R-package that allows users to systematically analyze and visualize time course data. Please cite "Temporal transcriptomic analysis using TrendCatcher identifies early…

  • adVNTRbioinformatics · genomics · structural-variation

    A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data

  • dysgubioinformatics · genomics · structural-variation

    Toolkit for calling structural variants using short or long reads

  • gatk-svbioinformatics · genomics · structural-variation

    A structural variation pipeline for short-read sequencing

  • kGWASflowbioinformatics · genomics · structural-variation

    kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.

sources
  1. api.github.com/repos/bcgsc/mavis
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2023-08-22, 76 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/11.json→ .entries["mavis"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.