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metagraph

imported

software/metagraph

Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly

Machine-generated from the listed sources and not yet reviewed by a human.

metagraph project image
GitHub preview card for ratschlab/metagraph. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
GPL-3.0(osi)
Status
active
Maturity
deployed
Organization
ratschlab
Country
unknown
Homepage
metagraph.ethz.ch
Repository
github.com/ratschlab/metagraph
Documentation
unknown
Tags
alignment · amino-acids · assembly · dna · genomics · graph · indexing · metagenomics
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • kmer-dbgenomics · indexing

    Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).

  • wallyalignment · assembly · genomics

    Wally: Visualization of aligned sequencing reads and contigs

  • vgdna · genomics · graph

    tools for working with genome variation graphs

  • Wochenendealignment · genomics · metagenomics

    Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3

  • catchdna · genomics · metagenomics

    A package for designing compact and comprehensive capture probe sets.

  • Amiraassembly · graph

    A tool to detect acquired AMR genes directly from long read sequencing data.

sources
  1. api.github.com/repos/ratschlab/metagraph
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-22, 229 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/28.json→ .entries["metagraph"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.