Wochenende
importedsoftware/wochenende
Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- MHH-RCUG
- Country
- unknown
- Repository
- github.com/MHH-RCUG/Wochenende
- Documentation
- unknown
- Tags
- alignment · bioinformatics · conda-environment · genomics · metagenomics · nanopore · pipeline · slurm
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- taxprofilerbioinformatics · metagenomics · nanopore · pipeline
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
- bioinformatics-toolkitbioinformatics · genomics · slurm
Command-line tools for genomics and proteomics analysis
- magbioinformatics · metagenomics · nanopore
Assembly and binning of metagenomes
- bambu-pipegenomics · nanopore · pipeline
Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu
- metagraphalignment · genomics · metagenomics
Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
- MMseqs2alignment · bioinformatics · metagenomics
MMseqs2: ultra fast and sensitive search and clustering suite
- api.github.com/repos/MHH-RCUG/Wochenenderetrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2022-08-30, 37 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/15.json→ .entries["wochenende"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.