muscle
importedsoftware/muscle
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and…
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- drive5.com/muscle
- Repository
- github.com/rcedgar/muscle
- Documentation
- unknown
- Tags
- algorithms · bioinformatics · biology · nucleotide-alignment · protein-alignment · protein-structure · protein-structure-alignment · sequence-clustering
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- usearch12bioinformatics · nucleotide-alignment · protein-alignment
Open-source usearch
- MMseqs2bioinformatics · sequence-clustering
MMseqs2: ultra fast and sensitive search and clustering suite
- block-aligneralgorithms · bioinformatics
SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.
- cute-nucleotidesalgorithms · bioinformatics
Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
- directlfqalgorithms · bioinformatics
Fast and accurate label-free quantification for small and very large numbers of proteomes
- genedexalgorithms · bioinformatics
A small and fast FM-Index for Rust
- api.github.com/repos/rcedgar/muscleretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-04-20, 287 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/18.json→ .entries["muscle"]
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