cute-nucleotides
importedsoftware/cute-nucleotides
Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- algorithms · avx2 · bioinformatics · rust · simd · sse
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- block-aligneralgorithms · avx2 · bioinformatics · simd
SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.
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A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
- pyrodigalbioinformatics · simd
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
- directlfqalgorithms · bioinformatics
Fast and accurate label-free quantification for small and very large numbers of proteomes
- genedexalgorithms · bioinformatics
A small and fast FM-Index for Rust
- musclealgorithms · bioinformatics
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and…
- api.github.com/repos/Daniel-Liu-c0deb0t/cute-nucleotidesretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2020-12-30, 131 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
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