orthologr
importedsoftware/orthologr
Genome wide orthology inference and dNdS estimation
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-2.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- drostlab
- Country
- unknown
- Homepage
- drostlab.github.io/orthologr/
- Repository
- github.com/drostlab/orthologr
- Documentation
- unknown
- Tags
- biomartr · blast · blast-searches · codon-alignment · comparative · comparative-genomics · comparative-genomics-studies · comparing-genomes · dnds-estimation · entire-genomes · genomics · genomics-studies · orthologous-genes · orthology-inference · proteome · r · retrieve-genomes · sequence-alignment · sequence-alignments · species
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- get_phylomarkerscodon-alignment · genomics
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
- BRIGblast · comparative-genomics · genomics
BRIG is a cross-platform (Windows/Mac/Linux) application that displays circular comparison images of multiple genomes using BLAST.
- jcviblast · comparative-genomics · genomics
Python library to facilitate genome assembly, annotation, and comparative genomics
- sequenceserverblast · genomics · sequence-alignment
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)
- orthofishergenomics · orthology-inference
a broadly applicable tool for automated gene identification and retrieval
- orthosnapgenomics · orthology-inference
a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees
- api.github.com/repos/drostlab/orthologrretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-13, 99 stars, license reported as GPL-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/25.json→ .entries["orthologr"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.