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pysradb

imported

software/pysradb

Package for fetching metadata and downloading data from SRA/ENA/GEO

Machine-generated from the listed sources and not yet reviewed by a human.

pysradb project image
GitHub preview card for saketkc/pysradb. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
BSD-3-Clause(osi)
Status
active
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
saketkc.github.io/pysradb
Repository
github.com/saketkc/pysradb
Documentation
unknown
Tags
bioinformatics · bioinformatics-pipeline · ena · ncbi-sra · ncbi-sra-archive · sra · sratoolkit
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • seq2sciencebioinformatics · bioinformatics-pipeline · sra

    Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.

  • iSeqbioinformatics · sra

    Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.

  • albatradisbioinformatics · bioinformatics-pipeline

    Comparative TraDIS analysis

  • aribabioinformatics · bioinformatics-pipeline

    Antimicrobial Resistance Identification By Assembly

  • Artemisbioinformatics · bioinformatics-pipeline

    Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

  • Bio-Tradisbioinformatics · bioinformatics-pipeline

    A set of tools to analyse the output from TraDIS analyses

sources
  1. api.github.com/repos/saketkc/pysradb
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-13, 369 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/12.json→ .entries["pysradb"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.