scPerturb
importedsoftware/scperturb
scPerturb: A resource and a python/R tool for single-cell perturbation data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- sanderlab
- Country
- unknown
- Homepage
- www.sanderlab.org/scPerturb/
- Repository
- github.com/sanderlab/scPerturb
- Documentation
- unknown
- Tags
- cite-seq · database · perturbation · python · r · scatac-seq · science · scrna-seq · single-cell · statistics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- scapeperturbation · scrna-seq · single-cell
Single-cell Analysis of Perturbational Effects using Machine Learning
- scrnaseq_processing_seuratcite-seq · scrna-seq · single-cell
A Snakemake workflow and MrBiomics module for processing and visualizing (multimodal) sc/snRNA-seq data generated with 10X Genomics Kits or in the MTX matrix file format powered by the R package…
- neuroblastomascatac-seq · scrna-seq · single-cell
Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis
- rustscenicscatac-seq · scrna-seq · single-cell
Faster, lower-memory Rust rewrite of the SCENIC and SCENIC+ analysis stack: GRN, AUCell, cisTarget, topics, peak-to-gene links, and eRegulons.
- SCPscatac-seq · scrna-seq
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
- ADTnormcite-seq · single-cell
ADTnorm normalizes the cell surface protein measurement of CITE-seq data, facilitating across batches and across studies data integration.
- api.github.com/repos/sanderlab/scPerturbretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-02-25, 186 stars, license reported as NOASSERTION. Category and schematic were assigned by keyword heuristics and are unreviewed. GitHub reported NOASSERTION; the licence was read from the LICENSE file as MIT, because GitHub's detector does not recognise open hardware licences.
Not yet verified by a human. Correct this record →
/v1/entries/53.json→ .entries["scperturb"]
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