scruff
importedsoftware/scruff
Single Cell RNA-seq UMI Filtering Facilitator
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- campbio
- Country
- unknown
- Repository
- github.com/campbio/scruff
- Documentation
- unknown
- Tags
- bioinformatics · scrna-seq · single-cell · umi
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- fastq_utilsscrna-seq · single-cell · umi
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
- migecsingle-cell · umi
An UMI-tagged sequencing swiss-knife. Built for amplicon sequencing of immune repertoires, ctDNA and rare mutations, single-cell sequencing.
- fgbiobioinformatics · umi
Tools for working with genomic and high throughput sequencing data.
- fgumibioinformatics · umi
High-performance UMI tools for NGS data analysis
- BadranSeqbioinformatics · scrna-seq · single-cell
The scRNA-seq figures your paper deserves. One package, zero boilerplate.
- beaniebioinformatics · scrna-seq · single-cell
Tool for group biology estimation in single-cell RNAseq data
- api.github.com/repos/campbio/scruffretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-10-06, 10 stars, license reported as NOASSERTION. Category and schematic were assigned by keyword heuristics and are unreviewed. GitHub reported NOASSERTION; the licence was read from the LICENSE file as MIT, because GitHub's detector does not recognise open hardware licences.
Not yet verified by a human. Correct this record →
/v1/entries/14.json→ .entries["scruff"]
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