snakemake-ms-proteomics
importedsoftware/snakemake-ms-proteomics
Pipeline for automatic processing and quality control of mass spectrometry data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- MPUSP
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/MPUSP/snakemake-ms-proteomics
- Documentation
- unknown
- Tags
- bioinformatics · conda · mass-spectrometry · pipeline · proteomics · snakemake · snakemake-workflow · workflow
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- kGWASflowbioinformatics · conda · pipeline · snakemake · workflow
kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
- snakemake-ont-bacterial-variantsconda · snakemake · workflow
A Snakemake workflow for the identification of variants in bacterial genomes using nanopore long-read sequencing.
- mspepidmass-spectrometry · pipeline · proteomics · workflow
This pipeline performs the peptide identification of MS2 spectra from a proteomics experiment. For this, different search algorithm and rescoring approaches can be selected.
- grenepipesnakemake · snakemake-workflow
A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - for sampled individuals, and for pool sequencing.
- warlocksnakemake · snakemake-workflow
Warlock is a snakemake workflow to spawn multiple demons (deme-based oncology models) as jobs running around on a cluster environment 😈😈
- nf-encyclopediabioinformatics · pipeline · proteomics · workflow
A NextFlow pipeline for chromatogram library DIA proteomics workflows
- api.github.com/repos/MPUSP/snakemake-ms-proteomicsretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-01-30, 14 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
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