souporcell
importedsoftware/souporcell
Clustering scRNAseq by genotypes
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/wheaton5/souporcell
- Documentation
- unknown
- Tags
- bioinformatics · computational-biology · genomics · scrna-seq · scrna-seq-analysis · scrnaseq
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- scClustVizscrna-seq · scrna-seq-analysis · scrnaseq
Explore and share your scRNAseq clustering results
- irescuebioinformatics · scrna-seq · scrnaseq
Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq at locus- or subfamily-level
- oracle-scrna-seqbioinformatics · computational-biology · genomics · scrna-seq
Single-cell RNA-seq following scverse practices: QC, doublet detection, normalization, batch correction, clustering, marker genes, and cell-type annotation, with optional trajectory analysis.
- PeakATailbioinformatics · computational-biology · genomics · scrna-seq
Single-cell APA peak calling and poly(A) tail analysis from scRNA-seq. Detects polyadenylation sites, quantifies 3'UTR length switching, and compares APA usage across cell clusters and samples.
- BITFAMscrna-seq · scrna-seq-analysis
BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequencing data. Please see Gao S et al., Genome Research (2021)…
- FRmatchscrna-seq · scrna-seq-analysis
Cell type matching in single-cell RNA-sequencing data using FR-Match
- api.github.com/repos/wheaton5/souporcellretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-04-30, 212 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
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/v1/entries/35.json→ .entries["souporcell"]
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