TOBIAS
importedsoftware/tobias
Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- loosolab
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/loosolab/TOBIAS
- Documentation
- unknown
- Tags
- atac-seq · bioinformatics · footprinting
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- fp-toolsatac-seq · bioinformatics · footprinting
Command-first ATAC-seq footprinting, motif analysis, and reproducible interactive reports
- craftgrnatac-seq · bioinformatics
Combined RNA and ATAC Footprint Training of Gene Regulatory Network
- NucleoATACatac-seq · bioinformatics
nucleosome calling using ATAC-seq
- rustscenicatac-seq · bioinformatics
Faster, lower-memory Rust rewrite of the SCENIC and SCENIC+ analysis stack: GRN, AUCell, cisTarget, topics, peak-to-gene links, and eRegulons.
- scATAC-proatac-seq · bioinformatics
A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
- seq2scienceatac-seq · bioinformatics
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
- api.github.com/repos/loosolab/TOBIASretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-03, 254 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/41.json→ .entries["tobias"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.