aletsch

Category

Software & Systems

Subcategory

unknown

License

BSD-3-Clause(osi)

Status

maintained

Maturity

deployed

Organization

Shao-Group

Country

unknown

Homepage

unknown

Repository

github.com/Shao-Group/aletsch

Documentation

unknown

Tags

meta-assembly · rna-seq · single-cell · transcriptome-assembly

Regulatory

unknown

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• alevin-fryrna-seq · single-cell

  🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

• AstrocytesHeterogenityARCrna-seq · single-cell

  Analysis of proteomics, bulk and single cell RNA-seq data to investigate reorganisation of astrocytic molecular identity

• AutoImputerna-seq · single-cell

  AutoImpute : Autoencoder based imputation of single cell RNA-seq data

• bambu-piperna-seq · single-cell

  Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu

• BgeeDB_Rrna-seq · single-cell

  Source code of the R packge BgeeDB to use data from the Bgee database

• BITFAMrna-seq · single-cell

  BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequencing data. Please see Gao S et al., Genome Research (2021)…

1. api.github.com/repos/Shao-Group/aletsch
   retrieved 2026-08-25 · via github-api

   Machine-imported from GitHub search. Last push 2025-04-04, 9 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.

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