bam-to-ychr-calls
importedsoftware/bam-to-ychr-calls
From .bam to .csv with annotated Y-chromosome variants
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/fj-blanco/bam-to-ychr-calls
- Documentation
- unknown
- Tags
- ancient-dna · phylogeny · variant-calling · y-chromosome
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- grenepipeancient-dna · variant-calling
A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - for sampled individuals, and for pool sequencing.
- mapacheancient-dna
mapping pipeline for ancient DNA
- bactmapphylogeny
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
- ipyradphylogeny
Interactive assembly and analysis of RAD-seq data sets
- LAMLphylogeny
LAML is a maximum likelihood algorithm to infer cell phylogeny from dynamic lineage tracing data
- tidetreephylogeny
A Bayesian phylogenetic framework to estimate single-cell trees and population dynamic parameters from genetic lineage tracing data
- api.github.com/repos/fj-blanco/bam-to-ychr-callsretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2023-12-26, 3 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/48.json→ .entries["bam-to-ychr-calls"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.