ipyrad
importedsoftware/ipyrad
Interactive assembly and analysis of RAD-seq data sets
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- ipyrad.readthedocs.io
- Repository
- github.com/dereneaton/ipyrad
- Documentation
- unknown
- Tags
- assembly · genomics · phylogeny · rad-seq
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- bactmapgenomics · phylogeny
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
- bam-to-ychr-callsphylogeny
From .bam to .csv with annotated Y-chromosome variants
- LAMLphylogeny
LAML is a maximum likelihood algorithm to infer cell phylogeny from dynamic lineage tracing data
- tidetreephylogeny
A Bayesian phylogenetic framework to estimate single-cell trees and population dynamic parameters from genetic lineage tracing data
- assemblyticsassembly · genomics
Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.
- jcviassembly · genomics
Python library to facilitate genome assembly, annotation, and comparative genomics
- api.github.com/repos/dereneaton/ipyradretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-03-03, 82 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/50.json→ .entries["ipyrad"]
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