cellrangerRkit

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software/cellrangerrkit

Non-official Git repository for R package cellrangerRkit (currently not available elsewhere; I'm not affiliated with 10x)

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similar by tags

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NGSOmics_Programming10x-genomics · single-cell
Computational biology/bioinformatics workflows, codes, tech & concept notes on NGS data
singlecell-variantcalling-pipeline10x-genomics · single-cell
This repository provides an end-to-end workflow for variant calling from single-cell RNA-seq data (scRNA-seq) using Cell Ranger, custom Python BAM splitting, and cellsnp-lite. The pipeline works…
seurigiotto-benchmark-framework10x-genomics
Optimized pipelines for Spatial Transcriptomics (ST) data analysis using Seurat & Giotto, designed for reproducible benchmarking and biological insight.
spatialvi10x-genomics
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
SigBridgeRpackage · single-cell
SigBridgeR: Integrative Framework and Toolkit for Single-Cell Screening of Phenotype-Associated Cells
HDAnalyzeRpackage
HDAnalyzeR: Streamlining Proteomic Data Analysis for Biomarker Research

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api.github.com/repos/hb-gitified/cellrangerRkit
retrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2019-05-06, 19 stars, license reported as AGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

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