hts-nim-tools
importedsoftware/hts-nim-tools
useful command-line tools written to showcase hts-nim
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- github.com/brentp/hts-nim
- Repository
- github.com/brentp/hts-nim-tools
- Documentation
- unknown
- Tags
- bam · bioinformatics · genomics · nim · nim-lang · vcf · vcf-filtering
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- hts-nimbioinformatics · genomics · nim · nim-lang
nim wrapper for htslib for parsing genomics data files
- indelopegenomics · nim-lang · vcf
find large indels (in the blind spot between GATK/freebayes and SV callers)
- cljambam · bioinformatics · genomics · vcf
A DNA Sequence Alignment/Map (SAM) library for Clojure
- bioSyntaxbam · bioinformatics · vcf
Syntax highlighting for computational biology
- hts-pythonbam · bioinformatics · genomics
pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
- ref-solverbam · bioinformatics · genomics
Identify which human reference genome was used to align a BAM/SAM/CRAM file
- api.github.com/repos/brentp/hts-nim-toolsretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2020-11-10, 50 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/61.json→ .entries["hts-nim-tools"]
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