indelope
importedsoftware/indelope
find large indels (in the blind spot between GATK/freebayes and SV callers)
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/brentp/indelope
- Documentation
- unknown
- Tags
- genome-assembly · genomics · k-mer-counting · local-assembly · nim-lang · variant-calling · vcf
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- hts-nim-toolsgenomics · nim-lang · vcf
useful command-line tools written to showcase hts-nim
- hts-nimgenomics · nim-lang
nim wrapper for htslib for parsing genomics data files
- kmer-cntgenomics · k-mer-counting
Code examples of fast and simple k-mer counters for tutorial purposes
- kmerustgenomics · k-mer-counting
Bioinformatics 101 tool for counting unique k-length substrings in DNA
- OctopuSVgenomics · variant-calling · vcf
Merge and compare structural variants across callers, samples, and platforms. Standardizes BND-heavy output from GRIDSS, SvABA, Sniffles, and more.
- snpkitgenomics · variant-calling · vcf
Modular workflow for Microbial Variant Calling and SNP diagnostics.
- api.github.com/repos/brentp/indeloperetrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2017-12-03, 39 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/39.json→ .entries["indelope"]
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