hts-nim
importedsoftware/hts-nim
nim wrapper for htslib for parsing genomics data files
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- brentp.github.io/hts-nim/
- Repository
- github.com/brentp/hts-nim
- Documentation
- unknown
- Tags
- bioinformatics · genomics · high-throughput-sequencing · htslib · nim · nim-lang
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- hts-nim-toolsbioinformatics · genomics · nim · nim-lang
useful command-line tools written to showcase hts-nim
- cyvcf2bioinformatics · genomics · htslib
cython + htslib == fast VCF and BCF processing
- hts-pythonbioinformatics · genomics · htslib
pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
- indelopegenomics · nim-lang
find large indels (in the blind spot between GATK/freebayes and SV callers)
- varsimgenomics · high-throughput-sequencing
VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
- GEOparsebioinformatics · high-throughput-sequencing
Python library to access Gene Expression Omnibus Database (GEO)
- api.github.com/repos/brentp/hts-nimretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-05-02, 158 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
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/v1/entries/43.json→ .entries["hts-nim"]
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