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SCALPEL

imported

software/scalpel

Quantification of isoform usage and alternative polyadenylation (APA) from single-cell RNA-seq using a Nextflow-based pipeline.

Machine-generated from the listed sources and not yet reviewed by a human.

SCALPEL project image
GitHub preview card for plasslab/SCALPEL. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
AGPL-3.0(osi)
Status
maintained
Maturity
deployed
Organization
plasslab
Country
unknown
Homepage
unknown
Repository
github.com/plasslab/SCALPEL
Documentation
unknown
Tags
alternative-polyadenylation · bioinformatics · isoform-quantification · nextflow · scalpel · single-cell · transcriptomics
Regulatory
unknown
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  • MetaInformAntbioinformatics · single-cell · transcriptomics

    METAINFORMANT is a Python 3.11+ multi-omic bioinformatics toolkit spanning 28 modules and 650+ files for DNA, RNA-seq, protein, epigenome and single-cell analysis, GWAS with fine-mapping and eQTL,…

sources
  1. api.github.com/repos/plasslab/SCALPEL
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2025-11-06, 37 stars, license reported as AGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/19.json→ .entries["scalpel"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.