scanpy
importedsoftware/scanpy
Single-cell analysis in Python. Scales to >100M cells.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- scverse
- Country
- unknown
- Homepage
- scanpy.scverse.org
- Repository
- github.com/scverse/scanpy
- Documentation
- unknown
- Tags
- anndata · bioinformatics · data-science · machine-learning · python · scanpy · scverse · transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- anndataanndata · bioinformatics · scanpy · scverse · transcriptomics
Annotated data.
- CyteTypeanndata · scanpy · transcriptomics
Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data
- cirrocumulusanndata · bioinformatics · scanpy
Bring your single-cell data to life
- rapids-singlecellanndata · bioinformatics · scverse
rapids-singlecell: GPU-accelerated framework for scRNA analysis
- oracle-scrna-seqbioinformatics · scanpy · transcriptomics
Single-cell RNA-seq following scverse practices: QC, doublet detection, normalization, batch correction, clustering, marker genes, and cell-type annotation, with optional trajectory analysis.
- BRIDGEanndata · bioinformatics · transcriptomics
Scientific Agent for evidence-grounded evaluation of cell-therapy products.
- api.github.com/repos/scverse/scanpyretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-04, 2537 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/35.json→ .entries["scanpy"]
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