CyteType
importedsoftware/cytetype
Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- NygenAnalytics
- Country
- unknown
- Repository
- github.com/NygenAnalytics/CyteType
- Documentation
- unknown
- Tags
- agentic-ai · anndata · cell-state-prediction · celltype-annotation · celltype-identification · disease-prediction · llm · llm-agent · marker-genes · rna-seq · scanpy · single-cell · transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- anndataanndata · scanpy · transcriptomics
Annotated data.
- scanpyanndata · scanpy · transcriptomics
Single-cell analysis in Python. Scales to >100M cells.
- PIASOmarker-genes · single-cell · transcriptomics
PIASO: Precise Integrative Analysis of Single-cell Omics
- scCATCHmarker-genes · rna-seq · single-cell
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
- cirrocumulusanndata · scanpy · single-cell
Bring your single-cell data to life
- oracle-scrna-seqscanpy · single-cell · transcriptomics
Single-cell RNA-seq following scverse practices: QC, doublet detection, normalization, batch correction, clustering, marker genes, and cell-type annotation, with optional trajectory analysis.
- api.github.com/repos/NygenAnalytics/CyteTyperetrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-11, 136 stars, license reported as NOASSERTION. Category and schematic were assigned by keyword heuristics and are unreviewed. GitHub reported NOASSERTION; the licence was read from the LICENSE file as MIT, because GitHub's detector does not recognise open hardware licences.
Not yet verified by a human. Correct this record →
/v1/entries/46.json→ .entries["cytetype"]
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