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scCellFie

imported

software/sccellfie

scCellFie infers metabolic activities from single-cell and spatial transcriptomics and offers a variety of downstream analyses.

Machine-generated from the listed sources and not yet reviewed by a human.

scCellFie project image
GitHub preview card for earmingol/scCellFie. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
active
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
www.sccellfie.org
Repository
github.com/earmingol/scCellFie
Documentation
unknown
Tags
metabolic-modeling · metabolic-pathways · metabolism · single-cell · single-cell-transcriptomics · spatial-transcriptomics · systems-biology
Regulatory
unknown
built by · 1

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • metaGEMmetabolic-modeling · metabolism · systems-biology

    :gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

  • SCMeTAmetabolism · single-cell

    A python library for single-cell metabolism data analysis.

  • Metaboversemetabolism

    Visualization and analysis platform for metabolic data and network pattern recognition

  • bambu-pipesingle-cell · spatial-transcriptomics

    Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu

  • COSGsingle-cell · spatial-transcriptomics

    Accurate and fast cell marker gene identification with COSG

  • ENIGMAsingle-cell · spatial-transcriptomics

    A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)

sources
  1. api.github.com/repos/earmingol/scCellFie
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-08-05, 62 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/57.json→ .entries["sccellfie"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.