scgen
importedsoftware/scgen
Single cell perturbation prediction
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- theislab
- Country
- unknown
- Homepage
- scgen.readthedocs.io
- Repository
- github.com/theislab/scgen
- Documentation
- unknown
- Tags
- bioinformatics · deep-learning · generative-model · scrna-seq · single-cell · single-cell-genomics · transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- PIASObioinformatics · single-cell · single-cell-genomics · transcriptomics
PIASO: Precise Integrative Analysis of Single-cell Omics
- singleCellHaystack-pybioinformatics · single-cell · single-cell-genomics · transcriptomics
Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).
- oracle-scrna-seqbioinformatics · scrna-seq · single-cell · transcriptomics
Single-cell RNA-seq following scverse practices: QC, doublet detection, normalization, batch correction, clustering, marker genes, and cell-type annotation, with optional trajectory analysis.
- scRNA_seq_Analysisbioinformatics · scrna-seq · single-cell · transcriptomics
A collection of R scripts covering the entire analysis workflow for single-cell RNA sequencing (scRNA-seq).
- scCustomizescrna-seq · single-cell · single-cell-genomics
R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
- scDeepSort_performance_comparisonscrna-seq · single-cell · transcriptomics
The source code and results for different methods on annotating external testing datsets of human and mouse.
- api.github.com/repos/theislab/scgenretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2024-12-05, 352 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/47.json→ .entries["scgen"]
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