scRNA_seq_Analysis
importedsoftware/scrna-seq-analysis
A collection of R scripts covering the entire analysis workflow for single-cell RNA sequencing (scRNA-seq).
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/A-Ben-Mao/scRNA_seq_Analysis
- Documentation
- unknown
- Tags
- bioinformatics · r · rna-seq · scrna-seq · single-cell · transcriptomics
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- oracle-scrna-seqbioinformatics · scrna-seq · single-cell · transcriptomics
Single-cell RNA-seq following scverse practices: QC, doublet detection, normalization, batch correction, clustering, marker genes, and cell-type annotation, with optional trajectory analysis.
- scgenbioinformatics · scrna-seq · single-cell · transcriptomics
Single cell perturbation prediction
- BgeeDB_Rbioinformatics · rna-seq · scrna-seq · single-cell
Source code of the R packge BgeeDB to use data from the Bgee database
- PeakATailbioinformatics · rna-seq · scrna-seq · single-cell
Single-cell APA peak calling and poly(A) tail analysis from scRNA-seq. Detects polyadenylation sites, quantifies 3'UTR length switching, and compares APA usage across cell clusters and samples.
- MetaInformAntbioinformatics · rna-seq · single-cell · transcriptomics
METAINFORMANT is a Python 3.11+ multi-omic bioinformatics toolkit spanning 28 modules and 650+ files for DNA, RNA-seq, protein, epigenome and single-cell analysis, GWAS with fine-mapping and eQTL,…
- scDeepSort_performance_comparisonscrna-seq · single-cell · transcriptomics
The source code and results for different methods on annotating external testing datsets of human and mouse.
- api.github.com/repos/A-Ben-Mao/scRNA_seq_Analysisretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-10, 35 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/61.json→ .entries["scrna-seq-analysis"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.