scRNA-tools
importedsoftware/scrna-tools
Table of software for the analysis of single-cell RNA-seq data.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- scRNA-tools
- Country
- unknown
- Homepage
- www.scrna-tools.org
- Repository
- github.com/scRNA-tools/scRNA-tools
- Documentation
- unknown
- Tags
- database · rna-seq · scrna-seq · single-cell · single-cell-rna-seq · software · tools
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- phd-thesis-analysisrna-seq · scrna-seq · single-cell · single-cell-rna-seq
Code for the analysis chapter of my PhD thesis looking at kidney organoid scRNA-seq data
- irescuescrna-seq · single-cell · single-cell-rna-seq
Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq at locus- or subfamily-level
- scCustomizescrna-seq · single-cell · single-cell-rna-seq
R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
- SPLiT-Seq_demultiplexingscrna-seq · single-cell · single-cell-rna-seq
An unofficial demultiplexing strategy for SPLiT-seq RNA-Seq data
- scPerturbdatabase · scrna-seq · single-cell
scPerturb: A resource and a python/R tool for single-cell perturbation data
- alevin-fryrna-seq · single-cell · single-cell-rna-seq
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
- api.github.com/repos/scRNA-tools/scRNA-toolsretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-05, 341 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/36.json→ .entries["scrna-tools"]
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