singlem
importedsoftware/singlem
Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- wwood.github.io/singlem/
- Repository
- github.com/wwood/singlem
- Documentation
- unknown
- Tags
- bioinformatics · metagenomics · microbiome
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- BASALTbioinformatics · metagenomics · microbiome
Nature Communications | BASALT (Binning Across a Series of Assemblies Toolkit) for binning and refinement of short- and long-read sequencing data
- dada2bioinformatics · metagenomics · microbiome
Accurate sample inference from amplicon data with single nucleotide resolution
- DRAMbioinformatics · metagenomics · microbiome
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
- DRAMbioinformatics · metagenomics · microbiome
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
- Kun-pengbioinformatics · metagenomics · microbiome
Kun-peng: an ultra-fast, low-memory footprint and accurate taxonomy classifier for all
- metaGEMbioinformatics · metagenomics · microbiome
:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
- api.github.com/repos/wwood/singlemretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-18, 195 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/12.json→ .entries["singlem"]
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