vsearch
importedsoftware/vsearch
Versatile open-source tool for microbiome analysis
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- torognes.github.io/vsearch
- Repository
- github.com/torognes/vsearch
- Documentation
- unknown
- Tags
- amplicon · bioinformatics · chimera · clustering · fasta · fastq · metabarcoding · metagenomics · microbiome · search · sequence-alignment
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- dada2amplicon · bioinformatics · metabarcoding · metagenomics · microbiome
Accurate sample inference from amplicon data with single nucleotide resolution
- swarmbioinformatics · clustering · fasta · metabarcoding · microbiome
A robust and fast clustering method for amplicon-based studies
- seqan3bioinformatics · fasta · fastq · sequence-alignment
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
- viralreconamplicon · metagenomics
Assembly and intrahost/low-frequency variant calling for viral samples
- cljambioinformatics · fasta · fastq
A DNA Sequence Alignment/Map (SAM) library for Clojure
- pyfastxbioinformatics · fasta · fastq
a python package for fast random access to sequences from plain and gzipped FASTA/Q files
- api.github.com/repos/torognes/vsearchretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-21, 756 stars, license reported as NOASSERTION. Category and schematic were assigned by keyword heuristics and are unreviewed. GitHub reported NOASSERTION; the licence was read from the LICENSE file as GPL-3.0, because GitHub's detector does not recognise open hardware licences.
Not yet verified by a human. Correct this record →
/v1/entries/21.json→ .entries["vsearch"]
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