cellMarkerPipe
importedsoftware/cellmarkerpipe
Cell marker identification and evaluation pipeline in single cell transcriptomes.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- CC-BY-4.0(cc)
- Status
- dormant
- Maturity
- deployed
- Organization
- yao-laboratory
- Country
- unknown
- Repository
- github.com/yao-laboratory/cellMarkerPipe
- Documentation
- unknown
- Tags
- marker-gene-identification · single-cell
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- ADTnormsingle-cell
ADTnorm normalizes the cell surface protein measurement of CITE-seq data, facilitating across batches and across studies data integration.
- aletschsingle-cell
Assembler for multiple RNA-seq samples
- alevin-frysingle-cell
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
- ALLCoolssingle-cell
Toolkit for single-cell DNA methylation analysis.
- AnanseSeuratsingle-cell
Single cell ANANSE Gene-regulatory-network analysis from Seurat objects
- anndata2risingle-cell
Convert between AnnData and SingleCellExperiment
- api.github.com/repos/yao-laboratory/cellMarkerPiperetrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-01-09, 11 stars, license reported as CC-BY-4.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/11.json→ .entries["cellmarkerpipe"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.