chromoformer
importedsoftware/chromoformer
The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/dohlee/chromoformer
- Documentation
- unknown
- Tags
- artificial-intelligence · bioinformatics · deep-learning · epigenomics · gene-expression · genomics · histone-modifications · transcriptomics · transformer
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- enformer-pytorchartificial-intelligence · gene-expression · genomics · transformer
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
- helicalartificial-intelligence · bioinformatics · gene-expression · transformer
A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.
- MetaInformAntbioinformatics · epigenomics · genomics · transcriptomics
METAINFORMANT is a Python 3.11+ multi-omic bioinformatics toolkit spanning 28 modules and 650+ files for DNA, RNA-seq, protein, epigenome and single-cell analysis, GWAS with fine-mapping and eQTL,…
- ngs17epigenomics · genomics · transcriptomics
Materials used during #NGSchool2017
- scChromHMMhistone-modifications
🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.
- ALLCoolsbioinformatics · epigenomics · genomics
Toolkit for single-cell DNA methylation analysis.
- api.github.com/repos/dohlee/chromoformerretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2023-08-16, 39 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/24.json→ .entries["chromoformer"]
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