helical
importedsoftware/helical
A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- AGPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- helicalAI
- Country
- unknown
- Homepage
- www.helical-ai.com/
- Repository
- github.com/helicalAI/helical
- Documentation
- unknown
- Tags
- artificial-intelligence · bioinformatics · biology · deep-learning · dna-sequences · evo2 · foundation-models · gene-expression · geneformer · helixmrna · pre-trained-model · pre-training · rna · rna-seq · rnaseq · scgpt · transcriptformer · transformer · uce · vcf
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- enformer-pytorchartificial-intelligence · dna-sequences · gene-expression · transformer
Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch
- salmonbioinformatics · gene-expression · rna-seq · rnaseq
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
- RiNALMobioinformatics · biology · rna · rna-seq
RiboNucleic Acid (RNA) Language Model
- chromoformerartificial-intelligence · bioinformatics · gene-expression · transformer
The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)
- pygtftkbioinformatics · dna-sequences · rna-seq
A python package and a set of shell commands to handle GTF files
- nucleotide-transformerbiology · foundation-models · transformer
Foundation Models for Genomics & Transcriptomics
- api.github.com/repos/helicalAI/helicalretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-08-22, 230 stars, license reported as AGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/63.json→ .entries["helical"]
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