FooDMe
importedsoftware/foodme
A reproducible and scalable snakemake workflow for the analysis of DNA metabarcoding experiments, with a special focus on food and feed samples.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- CVUA-RRW
- Country
- unknown
- Homepage
- cvua-rrw.github.io/FooDMe
- Repository
- github.com/CVUA-RRW/FooDMe
- Documentation
- unknown
- Tags
- bioinformatics · food-authenticity · food-monitoring · metabarcoding · ngs · ngs-pipeline · pipeline · public-health
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- CSBB-Shinyngs · ngs-pipeline
Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics…
- snipgeniebioinformatics · ngs-pipeline
command line and desktop tool for microbial variant calling
- dada2bioinformatics · metabarcoding
Accurate sample inference from amplicon data with single nucleotide resolution
- swarmbioinformatics · metabarcoding
A robust and fast clustering method for amplicon-based studies
- vsearchbioinformatics · metabarcoding
Versatile open-source tool for microbiome analysis
- circrnabioinformatics · ngs · pipeline
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
- api.github.com/repos/CVUA-RRW/FooDMeretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2024-09-20, 3 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/43.json→ .entries["foodme"]
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