GEOparse
importedsoftware/geoparse
Python library to access Gene Expression Omnibus Database (GEO)
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/guma44/GEOparse
- Documentation
- unknown
- Tags
- bioinformatics · geo-database · high-throughput-sequencing · htseq · microarray · rna-seq · rna-sequencing
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- BioFigmicroarray · rna-seq
R package for visualization of omics data
- pylimmamicroarray · rna-seq
Python port of R limma for differential expression analysis
- hts-nimbioinformatics · high-throughput-sequencing
nim wrapper for htslib for parsing genomics data files
- fastq_utilshigh-throughput-sequencing
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
- varsimhigh-throughput-sequencing
VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
- AutoImputebioinformatics · rna-seq
AutoImpute : Autoencoder based imputation of single cell RNA-seq data
- api.github.com/repos/guma44/GEOparseretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2024-07-27, 162 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/37.json→ .entries["geoparse"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.