varsim
importedsoftware/varsim
VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-2-Clause(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- bioinform
- Country
- unknown
- Homepage
- bioinform.github.io/varsim/
- Repository
- github.com/bioinform/varsim
- Documentation
- unknown
- Tags
- genomics · high-throughput-sequencing · simulation · validation
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- fastq_utilshigh-throughput-sequencing · validation
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
- hts-nimgenomics · high-throughput-sequencing
nim wrapper for htslib for parsing genomics data files
- GEOparsehigh-throughput-sequencing
Python library to access Gene Expression Omnibus Database (GEO)
- MutScanvalidation
Detect and visualize target mutations by scanning FastQ files directly
- fwdpy11genomics · simulation
Forward-time simulation in Python using fwdpp
- msprimegenomics · simulation
Simulate ARGs and genomic sequence data using population genetic models
- api.github.com/repos/bioinform/varsimretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2024-10-03, 93 stars, license reported as BSD-2-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/53.json→ .entries["varsim"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.