openproblems-v2
importedsoftware/openproblems-v2
Formalizing and benchmarking open problems in single-cell genomics
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- openproblems-bio
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- benchmarking · nextflow · single-cell · viash
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- cievadbenchmarking · nextflow
A tool suite for a simple, streamlined and rapid evaluation of variant callsets
- scib-reproducibilitybenchmarking · single-cell
Additional code and analysis from the single-cell integration benchmarking project
- SCP_recommendationsbenchmarking · single-cell
Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an MIT license.
- AsaruSimnextflow · single-cell
10X single cell Nanopore reads simulation workflow. Complete documentation avialable at: https://GenomiqueENS.github.io/AsaruSim/
- bambu-pipenextflow · single-cell
Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu
- hadgenextflow · single-cell
Comprehensive pipeline for donor demultiplexing in single cell
- api.github.com/repos/openproblems-bio/openproblems-v2retrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-06-11, 56 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/44.json→ .entries["openproblems-v2"]
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