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picovcf

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software/picovcf

Single-header C++ library for fast/low-memory VCF (Variant Call Format) parsing.

Machine-generated from the listed sources and not yet reviewed by a human.

picovcf project image
GitHub preview card for aprilweilab/picovcf. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
maintained
Maturity
deployed
Organization
aprilweilab
Country
unknown
Homepage
picovcf.readthedocs.io/
Repository
github.com/aprilweilab/picovcf
Documentation
unknown
Tags
c-plus-plus · comp-bio · header-only · header-only-library · variant-calling · vcf
Regulatory
unknown
built by · 2

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • pyigdcomp-bio · variant-calling

    Python-only parser for Indexable Genotype Data (IGD) format.

  • gramtoolsc-plus-plus · variant-calling

    Genome inference from a population reference graph

  • indelopevariant-calling · vcf

    find large indels (in the blind spot between GATK/freebayes and SV callers)

  • OctopuSVvariant-calling · vcf

    Merge and compare structural variants across callers, samples, and platforms. Standardizes BND-heavy output from GRIDSS, SvABA, Sniffles, and more.

  • snpkitvariant-calling · vcf

    Modular workflow for Microbial Variant Calling and SNP diagnostics.

  • variant-extractorvariant-calling · vcf

    Deterministic and standard extractor of SNVs, indels and structural variants (SVs) from VCF files.

sources
  1. api.github.com/repos/aprilweilab/picovcf
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2025-12-02, 23 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/11.json→ .entries["picovcf"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.